Conde became Guinea's first democratically elected president in 2010 and was re-elected in 2015.Â
But last year he pushed through a controversial new constitution that allowed him to run for a third term in October 2020.
The move sparked mass demonstrations in which dozens of protesters were killed. Conde won re-election but the political opposition maintained the poll was a sham.
Pressure is mounting on the military to start the trial of those suspected of being behind the violence.
The junta that seized power in the West African state of Guinea has unveiled a "transitional charter" that it says will steer the country back to civilian rule.
The document, read out on national television late Monday, sets down a series of tasks, including the drafting of a new constitution and holding "free, democratic and transparent" elections, although it does not spell out how long the transition will last.
Troops led by a special forces colonel, Mamady Doumbouya, on September 5 arrested 83-year-old President Alpha Conde, who had been battling a wave of unpopularity in one of Africa's poorest and most volatile countries.
Conde became Guinea's first democratically elected president in 2010 and was re-elected in 2015.Â
But last year he pushed through a controversial new constitution that allowed him to run for a third term in October 2020.
The move sparked mass demonstrations in which dozens of protesters were killed. Conde won re-election but the political opposition maintained the poll was a sham.
Transition planÂ
The new charter identifies four institutions or figures that will be in charge of the transition.
They are the National Rallying Committee for Development (CNRD) set up by the junta and headed by Doumbouya; the president of the transition, who will also serve as the head of the CNRD, head of state and armed forces chief; a government headed by a civilian prime minister; and a legislative body called the National Transition Council or CNT.
No member of these institutions will be allowed to take part "in either national or local elections, which will be organised at the end of the transition period".
The turbulence in the former French colony is deeply concerning for the regional Economic Community of West African States (Ecowas).
The coup is the second to take place in the region, after Mali, in less than 13 months.
Ecowas is demanding that elections be held within six months, as well as Conde's release.
Guinea's ambassador to the United Nations told the UN General Assembly on Monday that the electoral rolls would be revised and the new constitution drafted ahead of new elections.
The CNT, comprising 81 members drawn from political parties, civil society, trade unions, employers, the security forces and other bodies, will be tasked with drawing up the new constitution.
No members of Conde's government or the institutions of the former regime can be named to it.
The FNDC coalition, which spearheaded the protests against Conde, on Friday called for 100 people to be excluded from the transition process, including former ministers, judges, governors and other politicians.
Fight against impunityÂ
Doumbouya visited the Bambeto cemetery in the suburbs of capital Conakry on Monday to pay respects to those killed during the crackdown on protests against Conde's third term.
The FNDC said it hoped the visit "will be followed by the organisation of a fair and equitable trial so that those responsible for the violence can be held accountable for their actions, therefore putting an end to impunity" in Guinea.
In another highly symbolic gesture, Doumbouya went to Conakry's main sports stadium where he asked one of his guards to lead prayers in memory of a 2009 massacre, an AFP correspondent saw.
It came 12 years to the day after troops under former army strongman Moussa Dadis Camara killed at least 157 protesters and raped dozens of women.
Pressure is mounting on the military to start the trial of those suspected of being behind the violence.
Several humanitarian organisations, including local victims, Amnesty International and Human Rights Watch, said the families of those killed "should not have to wait any longer for justice".
"As Guinea embarks on a political transition process... the opening of this trial would send a strong signal that the authorities are willing to put respect for human rights and the fight against impunity at the centre of their priorities," the groups said in a statement.
